Restructure the binned data.

`sc.restruct()` Add Description

sc.restruct(
  scmpObj,
  end_node_list,
  root_node,
  link_node_list,
  assay_name = "counts",
  aggregate = "sum",
  link_sep = "_links_",
  verbose = TRUE
)

Arguments

scmpObj

An object of class ScMaSigPro. path assignment in 'Sparse' or 'Dense' data.

end_node_list

A list of end nodes in of the branch.

root_node

A character string specifying the root node.

link_node_list

A list of links between two nodes.

assay_name

Name of the Assay in sparse data from which the counts are used. (Default = "counts").

aggregate

A character string specifying the method to aggregate counts within each cluster. Available options are 'mean' or 'sum'. (Default = "sum").

link_sep

A character string to separate the link nodes. (Default = "_links_")

verbose

Print detailed output in the console. (Default is TRUE)

Value

An object of class ScMaSigPro, with updated `Dense` slot.

See also

estBinSize, discretize, create_range

Author

Priyansh Srivastava spriyansh29@gmail.com