This function generates plots to visualize the Dense slot cell metadata from a ScMaSigPro object. It produces tile plot to display the bin sizes across different binned time intervals and paths.

plotBinTile(
  scmpObj,
  path_col = scmpObj@Parameters@path_col,
  bin_size_col = scmpObj@Parameters@bin_size_col,
  bin_ptime_col = scmpObj@Parameters@bin_ptime_col
)

Arguments

scmpObj

An object of class ScMaSigPro.

path_col

A character string representing the column name for branching path assignment in 'Sparse' or 'Dense' slot.

bin_size_col

A character string representing the name of the column in which bin sizes per bin are stored. (Default is "scmp_bin_size").

bin_ptime_col

A character string representing the column name for binned Pseudotime values in 'Dense' data. (Default is "scmp_binned_pseudotime").

Value

ggplot2 plot object.

Author

Priyansh Srivastava spriyansh29@gmail.com